Pseudomonas putida W619, PputW619_2502

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppw03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF09850 Type VI secretion system protein DotU IPR017732 Type IV / VI secretion system, DotU 21 219 1.6E-52
TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family IPR017732 Type IV / VI secretion system, DotU 20 225 4.0E-61
Gene3D G3DSA:1.25.40.590 IPR038522 Type IV / VI secretion system, DotU superfamily 16 182 1.2E-39

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.