Pseudomonas putida GB-1, PputGB1_0113

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00729
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0051536 iron-sulfur cluster binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00729
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd01335 Radical_SAM - - 67 245 1.21067E-14
Gene3D G3DSA:3.80.30.30 - - - 106 300 1.0E-27
SUPERFAMILY SSF102114 Radical SAM enzymes - - 52 270 1.19E-12
Pfam PF04055 Radical SAM superfamily IPR007197 Radical SAM 67 245 2.4E-15
SMART SM00729 MiaB IPR006638 Elp3/MiaA/NifB-like, radical SAM core domain 63 288 1.3E-6
PANTHER PTHR43432 SLR0285 PROTEIN IPR040086 Protein MJ0683-like 40 336 3.0E-104
NCBIfam NF033668 NCBIFAM: PA0069 family radical SAM protein - - 8 352 0.0
SFLD SFLDG01084 Uncharacterised Radical SAM Subgroup 2 IPR040086 Protein MJ0683-like 38 333 0.0
SFLD SFLDS00029 Radical SAM IPR007197 Radical SAM 38 333 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.