Pseudomonas putida GB-1, PputGB1_1024
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:2.60.40.1590 | Peptidoglycan hydrolase domains | - | - | 23 | 117 | 1.0E-32 |
| Pfam | PF18421 | Peptidase family M23 N-terminal domain | IPR040487 | Peptidase family M23, N-terminal | 30 | 98 | 8.1E-24 |
| Pfam | PF01551 | Peptidase family M23 | IPR016047 | Peptidase M23 | 172 | 266 | 1.9E-28 |
| CDD | cd12797 | M23_peptidase | - | - | 173 | 257 | 3.83864E-38 |
| PANTHER | PTHR21666 | PEPTIDASE-RELATED | - | - | 82 | 267 | 1.3E-33 |
| Gene3D | G3DSA:2.70.70.10 | Glucose Permease (Domain IIA) | IPR011055 | Duplicated hybrid motif | 118 | 274 | 7.5E-47 |
| SUPERFAMILY | SSF51261 | Duplicated hybrid motif | IPR011055 | Duplicated hybrid motif | 103 | 270 | 2.35E-48 |
| FunFam | G3DSA:2.70.70.10:FF:000019 | M23 family peptidase | - | - | 118 | 272 | 3.2E-69 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.