Pseudomonas putida GB-1, PputGB1_1025 (xseA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_1025
Name
xseA
Replicon chromosome
Genomic location 1168759 - 1170150 (- strand)

Cross-References

RefSeq YP_001667271.1
GI 167032040
EC Number 3.1.11.6
Entrez 5868785
INSDC ABY96935.1
NCBI Locus Tag PputGB1_1025
UniParc UPI0000F25105
UniProtKB Acc B0KRE1
UniProtKB ID B0KRE1_PSEPG
UniRef100 UniRef100_B0KRE1
UniRef50 UniRef50_Q886X9
UniRef90 UniRef90_Q88P26

Product

Feature Type CDS
Coding Frame 1
Product Name
exodeoxyribonuclease VII large subunit
Synonyms
Evidence for Translation
Charge (pH 7) 17.62
Kyte-Doolittle Hydrophobicity Value -0.287
Molecular Weight (kDa) 51855.1
Isoelectric Point (pI) 11.13

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 530 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001887 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_1025
Search term: xseA

Human Homologs

References

No references are associated with this feature.