Pseudomonas putida GB-1, PputGB1_1796
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida GB-1
GCF_000019125.1|latest |
| Locus Tag |
PputGB1_1796
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 2014449 - 2015759 (+ strand) |
Cross-References
| RefSeq | YP_001668035.1 |
| GI | 167032804 |
| Entrez | 5869576 |
| NCBI Locus Tag | PputGB1_1796 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
class III aminotransferase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -2.48 |
| Kyte-Doolittle Hydrophobicity Value | 0.020 |
| Molecular Weight (kDa) | 46653.8 |
| Isoelectric Point (pI) | 6.68 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 638 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG025516 (20 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PputGB1_1796
Search term: class III aminotransferase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
ethanolamine-phosphate phospho-lyase [Source:HGNC Symbol;Acc:HGNC:14404]
E-value:
4.2e-87
Percent Identity:
40.6
|
References
No references are associated with this feature.