Pseudomonas aeruginosa PACS2, A0K_RS00945

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd06261
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd06261
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.3720.10 - IPR035906 MetI-like superfamily 322 516 1.2E-20
CDD cd06261 TM_PBP2 IPR000515 ABC transporter type 1, transmembrane domain MetI-like 371 499 3.37825E-7
Gene3D G3DSA:1.10.3720.10 - IPR035906 MetI-like superfamily 52 254 2.6E-16
Pfam PF00528 Binding-protein-dependent transport system inner membrane component IPR000515 ABC transporter type 1, transmembrane domain MetI-like 85 253 2.0E-18
SUPERFAMILY SSF161098 MetI-like IPR035906 MetI-like superfamily 320 506 5.36E-24
FunFam G3DSA:1.10.3720.10:FF:000003 Aliphatic sulfonate ABC transporter permease - - 59 253 2.4E-60
PANTHER PTHR30151 ALKANE SULFONATE ABC TRANSPORTER-RELATED, MEMBRANE SUBUNIT - - 2 263 0.0
SUPERFAMILY SSF161098 MetI-like IPR035906 MetI-like superfamily 60 245 2.35E-24
Pfam PF00528 Binding-protein-dependent transport system inner membrane component IPR000515 ABC transporter type 1, transmembrane domain MetI-like 344 510 1.7E-19
CDD cd06261 TM_PBP2 IPR000515 ABC transporter type 1, transmembrane domain MetI-like 66 238 4.35403E-7

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.