Pseudomonas putida GB-1, PputGB1_2350

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016787 hydrolase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01546
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006526 arginine biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01892
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0019213 deacetylase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01892
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppg01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppg00220 Arginine biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppg01210 2-Oxocarboxylic acid metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppg01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppg01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppg01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.630.10 Zn peptidases - - 13 370 3.9E-106
Pfam PF01546 Peptidase family M20/M25/M40 IPR002933 Peptidase M20 69 380 2.2E-36
SUPERFAMILY SSF53187 Zn-dependent exopeptidases - - 8 382 1.36E-59
NCBIfam TIGR01892 JCVI: acetylornithine deacetylase IPR010169 Acetylornithine deacetylase ArgE 9 380 2.1E-126
SUPERFAMILY SSF55031 Bacterial exopeptidase dimerisation domain IPR036264 Bacterial exopeptidase dimerisation domain 176 281 7.18E-20
Gene3D G3DSA:3.30.70.360 - - - 176 293 3.9E-106
PANTHER PTHR43808 ACETYLORNITHINE DEACETYLASE - - 7 381 5.7E-83
CDD cd03894 M20_ArgE - - 8 381 0.0
Pfam PF07687 Peptidase dimerisation domain IPR011650 Peptidase M20, dimerisation domain 173 282 3.0E-23

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.