Pseudomonas putida GB-1, PputGB1_2373

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00529
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.40.50.100 - - - 58 118 9.8E-9
Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain 58 289 4.1E-14
Pfam PF00529 Cation efflux system protein CusB domain 1 IPR043602 Cation efflux system protein CusB, domain 1 37 344 6.9E-14
SUPERFAMILY SSF56954 Outer membrane efflux proteins (OEP) - - 93 211 7.06E-7
PANTHER PTHR30386 MEMBRANE FUSION SUBUNIT OF EMRAB-TOLC MULTIDRUG EFFLUX PUMP - - 15 383 6.9E-65
Coils Coil Coil - - 120 144 -
FunFam G3DSA:2.40.30.170:FF:000003 Multidrug resistance protein A - - 230 352 1.7E-52
Coils Coil Coil - - 158 178 -
SUPERFAMILY SSF111369 HlyD-like secretion proteins - - 58 111 2.88E-8
Gene3D G3DSA:2.40.30.170 - - - 232 350 2.0E-32
Gene3D G3DSA:1.10.287.470 Helix hairpin bin - - 119 186 3.8E-10

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.