Pseudomonas putida GB-1, PputGB1_2760

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	ppg03070	Bacterial secretion system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF69279	Phage tail proteins	-	-	25	195	8.5E-51
SUPERFAMILY	SSF69349	Phage fibre proteins	-	-	454	605	7.14E-32
Pfam	PF04717	Type VI secretion system/phage-baseplate injector OB domain	IPR006531	Gp5/Type VI secretion system Vgr protein, OB-fold domain	398	465	3.3E-15
PANTHER	PTHR32305	-	-	-	78	528	4.7E-58
Gene3D	G3DSA:4.10.220.110	-	-	-	233	298	1.7E-98
Gene3D	G3DSA:2.30.110.50	-	-	-	29	346	1.7E-98
NCBIfam	TIGR01646	JCVI: type VI secretion system tip protein VgrG	IPR006533	Type VI secretion system, RhsGE-associated Vgr protein	32	517	0.0
NCBIfam	TIGR03361	JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain	IPR017847	Type VI secretion system, RhsGE-associated Vgr family subset	24	535	0.0
Pfam	PF06715	Gp5 C-terminal repeat (3 copies)	IPR010609	Gp5, C-terminal	524	546	3.3E-4
SUPERFAMILY	SSF69279	Phage tail proteins	-	-	206	376	6.97E-31
Gene3D	G3DSA:2.40.50.230	-	IPR037026	Vgr protein, OB-fold domain superfamily	367	468	4.1E-42
SUPERFAMILY	SSF69255	gp5 N-terminal domain-like	-	-	376	464	3.79E-32
Gene3D	G3DSA:3.55.50.10	-	-	-	107	199	1.7E-98
Pfam	PF05954	Phage tail baseplate hub (GPD)	-	-	39	346	2.0E-93

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.