Pseudomonas putida GB-1, PputGB1_2768

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppg02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR35564 - IPR010732 Type VI secretion, TssG-like 1 338 6.5E-89
Pfam PF06996 Type VI secretion, TssG IPR010732 Type VI secretion, TssG-like 19 333 5.6E-103
NCBIfam TIGR03347 JCVI: type VI secretion system baseplate subunit TssG IPR010732 Type VI secretion, TssG-like 19 333 1.8E-107

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.