Pseudomonas putida GB-1, PputGB1_3234

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	ppg03070	Bacterial secretion system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF69279	Phage tail proteins	-	-	10	183	6.38E-52
Gene3D	G3DSA:4.10.220.110	-	-	-	243	306	3.3E-77
PANTHER	PTHR32305	-	-	-	53	556	4.9E-94
Pfam	PF05954	Phage tail baseplate hub (GPD)	-	-	28	349	5.4E-67
NCBIfam	TIGR01646	JCVI: type VI secretion system tip protein VgrG	IPR006533	Type VI secretion system, RhsGE-associated Vgr protein	207	525	1.4E-88
SUPERFAMILY	SSF69279	Phage tail proteins	-	-	215	387	1.63E-29
NCBIfam	TIGR01646	JCVI: type VI secretion system tip protein VgrG	IPR006533	Type VI secretion system, RhsGE-associated Vgr protein	21	187	4.7E-39
Gene3D	G3DSA:3.55.50.10	-	-	-	97	188	3.3E-77
SUPERFAMILY	SSF69349	Phage fibre proteins	-	-	464	673	6.59E-52
Gene3D	G3DSA:2.30.110.50	-	-	-	22	349	3.3E-77
Gene3D	G3DSA:2.40.50.230	-	IPR037026	Vgr protein, OB-fold domain superfamily	380	478	4.9E-37
SUPERFAMILY	SSF69255	gp5 N-terminal domain-like	-	-	386	473	1.8E-31
NCBIfam	TIGR03361	JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain	IPR017847	Type VI secretion system, RhsGE-associated Vgr family subset	14	543	0.0
Pfam	PF04717	Type VI secretion system/phage-baseplate injector OB domain	IPR006531	Gp5/Type VI secretion system Vgr protein, OB-fold domain	408	475	1.0E-12

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.