Pseudomonas putida GB-1, PputGB1_3987

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_3987
Name
Replicon chromosome
Genomic location 4435787 - 4436767 (- strand)

Cross-References

RefSeq YP_001670213.1
GI 167034982
Entrez 5871787
INSDC ABY99877.1
NCBI Locus Tag PputGB1_3987
UniParc UPI0000F2530F
UniProtKB Acc B0KR51
UniProtKB ID B0KR51_PSEPG
UniRef100 UniRef100_B0KR51
UniRef50 UniRef50_Q885K1
UniRef90 UniRef90_T2H585

Product

Feature Type CDS
Coding Frame 1
Product Name
AraC family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 1.78
Kyte-Doolittle Hydrophobicity Value -0.205
Molecular Weight (kDa) 36322.2
Isoelectric Point (pI) 7.57

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 415 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000860 (512 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_3987

Human Homologs

References

No references are associated with this feature.