Pseudomonas putida S16, PPS_1100

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppt03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF05860 TPS secretion domain IPR008638 Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain 29 277 3.0E-38
Pfam PF13332 Hemagglutinin repeat IPR025157 Hemagglutinin repeat 507 572 0.0037
MobiDBLite mobidb-lite consensus disorder prediction - - 1035 1050 -
MobiDBLite mobidb-lite consensus disorder prediction - - 1035 1081 -
Pfam PF13332 Hemagglutinin repeat IPR025157 Hemagglutinin repeat 1161 1316 1.9E-14
MobiDBLite mobidb-lite consensus disorder prediction - - 967 995 -
Pfam PF13332 Hemagglutinin repeat IPR025157 Hemagglutinin repeat 580 742 1.2E-6
NCBIfam TIGR01901 JCVI: filamentous hemagglutinin family N-terminal domain IPR008638 Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain 54 144 3.1E-14
Pfam PF13332 Hemagglutinin repeat IPR025157 Hemagglutinin repeat 292 414 1.9E-5
Gene3D G3DSA:2.160.20.10 - IPR012334 Pectin lyase fold 27 321 9.1E-74
SMART SM00912 Haemagg_act_2a IPR008638 Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain 36 156 5.6E-41
SUPERFAMILY SSF51126 Pectin lyase-like IPR011050 Pectin lyase fold/virulence factor 32 280 9.73E-45
MobiDBLite mobidb-lite consensus disorder prediction - - 636 670 -
Pfam PF13332 Hemagglutinin repeat IPR025157 Hemagglutinin repeat 769 847 0.0013
Pfam PF13332 Hemagglutinin repeat IPR025157 Hemagglutinin repeat 1010 1143 8.4E-8

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.