Pseudomonas putida S16, PPS_2845

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppt03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppt02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF14331 IcmF-related N-terminal domain IPR025743 IcmF-related, N-terminal domain 181 432 1.0E-55
PANTHER PTHR36153 INNER MEMBRANE PROTEIN-RELATED - - 3 553 0.0
Pfam PF06744 Type VI secretion protein IcmF C2-like domain IPR010623 Type VI secretion system IcmF, C-terminal 1142 1241 1.8E-20
Coils Coil Coil - - 465 485 -
Pfam PF06761 Intracellular multiplication and human macrophage-killing IPR009612 IcmF-related 491 878 2.4E-50
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 125 269 3.1E-7
Coils Coil Coil - - 952 972 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.