Pseudomonas putida S16, PPS_3055

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_3055
Name
Replicon chromosome
Genomic location 3430570 - 3431454 (+ strand)

Cross-References

RefSeq YP_004702484.1
GI 339487956
Entrez 10938687
INSDC AEJ13604.1
NCBI Locus Tag PPS_3055
UniParc UPI000217352B
UniProtKB Acc F8G1M5
UniProtKB ID F8G1M5_PSEP6
UniRef100 UniRef100_F8G1M5
UniRef50 UniRef50_B4EJ01
UniRef90 UniRef90_B0KPR1

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 2.14
Kyte-Doolittle Hydrophobicity Value -0.088
Molecular Weight (kDa) 32557.2
Isoelectric Point (pI) 7.87

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 530 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000789 (459 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_3055

Human Homologs

References

No references are associated with this feature.