Pseudomonas putida S16, PPS_3169
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF02371
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0004803 | transposase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF02371
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0006313 | transposition, DNA-mediated |
Inferred from Sequence Model
Term mapped from: InterPro:PF02371
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF02371 | Transposase IS116/IS110/IS902 family | IPR003346 | Transposase IS116/IS110/IS902, C-terminal | 45 | 127 | 1.5E-14 |
| PANTHER | PTHR33055 | TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT IS1111A | IPR047650 | Transposase IS110-like | 8 | 161 | 9.0E-17 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.