Pseudomonas putida S16, PPS_3180

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006725 cellular aromatic compound metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF001486
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppt01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppt00362 Benzoate degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppt01220 Degradation of aromatic compounds 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppt01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.70.1060 Dimeric alpha+beta barrel - - 1 94 3.8E-34
NCBIfam TIGR03221 JCVI: muconolactone Delta-isomerase IPR003464 Muconolactone delta-isomerase 2 91 6.0E-46
SUPERFAMILY SSF54909 Dimeric alpha+beta barrel IPR011008 Dimeric alpha-beta barrel 1 95 2.36E-37
Pfam PF02426 Muconolactone delta-isomerase IPR026029 Muconolactone isomerase domain 1 90 8.3E-38
PIRSF PIRSF001486 CatC IPR003464 Muconolactone delta-isomerase 1 94 8.7E-45

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.