Pseudomonas putida S16, PPS_3209
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: TGTAGGAGCAG-N72-CTGCTCCTACA | 3612319 | 3612412 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: TGCTGCGAAGAG-N38-CTCTTCGCAGCA | 3612335 | 3612396 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: TGTGCTGCAG-N3-CTGCAGCACA | 3612931 | 3612953 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CGCCCAGGGCC-N91-GGCCCTGGGCG | 3613495 | 3613607 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GCCATCGCCG-N100-CGGCGATGGC | 3613814 | 3613933 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CCTCTTCGCGGGCACGCCCGCTCCCACAGGT-N28-ACCTGTGGGAGCGGGCGTGCCCGCGAAGAGG | 3614741 | 3614830 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |