Pseudomonas putida S16, PPS_3217

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004474 malate synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01274
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006097 glyoxylate cycle
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01274
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF51645
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppt00630 Glyoxylate and dicarboxylate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppt00620 Pyruvate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppt01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppt01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppt01200 Carbon metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppt01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.1220.12 Malate synthase, domain III IPR044856 Malate synthase, C-terminal superfamily 584 723 3.5E-77
SUPERFAMILY SSF51645 Malate synthase G IPR011076 Malate synthase superfamily 4 719 0.0
Coils Coil Coil - - 46 66 -
Gene3D G3DSA:3.20.20.360 Malate synthase, domain 3 IPR046363 Malate synthase, N-terminal and TIM-barrel domains 212 583 0.0
PANTHER PTHR42739 MALATE SYNTHASE G IPR006253 Malate synthase G 4 719 0.0
Pfam PF01274 Malate synthase IPR001465 Malate synthase 14 694 0.0
Gene3D G3DSA:3.20.20.360 Malate synthase, domain 3 IPR046363 Malate synthase, N-terminal and TIM-barrel domains 1 211 1.5E-59
TIGRFAM TIGR01345 malate_syn_G: malate synthase G IPR006253 Malate synthase G 6 720 0.0
Hamap MF_00641 Malate synthase G [glcB]. IPR006253 Malate synthase G 1 723 390.72583

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.