Pseudomonas putida S16, PPS_3219

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_3219
Name
Replicon chromosome
Genomic location 3624996 - 3626429 (+ strand)

Cross-References

RefSeq YP_004702646.1
GI 339488118
Entrez 10938849
INSDC AEJ13766.1
NCBI Locus Tag PPS_3219
UniParc UPI0002173A74
UniProtKB Acc F8G423
UniProtKB ID F8G423_PSEP6
UniRef100 UniRef100_A0A099N0P4
UniRef50 UniRef50_A0A0A1FAL4
UniRef90 UniRef90_Q88GH3

Product

Feature Type CDS
Coding Frame 1
Product Name
GntR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 6.61
Kyte-Doolittle Hydrophobicity Value -0.104
Molecular Weight (kDa) 52.5
Isoelectric Point (pI) 8.23

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 533 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000265 (437 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_3219

Human Homologs

References

No references are associated with this feature.