Pseudomonas putida S16, PPS_3220

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_3220
Name
Replicon chromosome
Genomic location 3626422 - 3627618 (- strand)

Cross-References

RefSeq YP_004702647.1
GI 339488119
Entrez 10938850
INSDC AEJ13767.1
NCBI Locus Tag PPS_3220
UniParc UPI0002173A75
UniProtKB Acc F8G424
UniProtKB ID F8G424_PSEP6
UniRef100 UniRef100_A0A099N2Z0
UniRef50 UniRef50_I7ATS4
UniRef90 UniRef90_I7ATS4

Product

Feature Type CDS
Coding Frame 1
Product Name
major facilitator superfamily transporter
Synonyms
Evidence for Translation
Charge (pH 7) 13.57
Kyte-Doolittle Hydrophobicity Value 0.824
Molecular Weight (kDa) 41.8
Isoelectric Point (pI) 10.70

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 180 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000270 (1361 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_3220

Human Homologs

References

No references are associated with this feature.