Pseudomonas putida S16, PPS_3224

Gene Feature Overview

Strain	Pseudomonas putida S16 GCF_000219705.1|latest
Locus Tag	PPS_3224
Name
Replicon	chromosome
Genomic location	3629956 - 3631140 (+ strand)

Cross-References

RefSeq	YP_004702651.1
GI	339488123
Entrez	10938854
INSDC	AEJ13771.1
NCBI Locus Tag	PPS_3224
UniParc	UPI0002173A79
UniProtKB Acc	F8G428
UniProtKB ID	F8G428_PSEP6
UniRef100	UniRef100_F8G428
UniRef50	UniRef50_Q0KBP1
UniRef90	UniRef90_B1J7J6

Product

Feature Type	CDS
Coding Frame	1
Product Name	beta-ketothiolase
Synonyms
Evidence for Translation
Charge (pH 7)	-1.19
Kyte-Doolittle Hydrophobicity Value	0.108
Molecular Weight (kDa)	40.9
Isoelectric Point (pI)	6.72

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 471 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG016485 (96 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PPS_3224 Search term: beta-ketothiolase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000285093 acetyl-CoA acyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:83] E-value: 5.4e-94 Percent Identity: 45.6
Ensembl 110, assembly GRCh38.p14	ENSP00000466015 acetyl-CoA acyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:83] E-value: 5.4e-94 Percent Identity: 45.6

References