Pseudomonas putida S16, PPS_3226

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_3226
Name
Replicon chromosome
Genomic location 3632015 - 3632596 (+ strand)

Cross-References

RefSeq YP_004702653.1
GI 339488125
Entrez 10938856
INSDC AEJ13773.1
NCBI Locus Tag PPS_3226
UniParc UPI0002173A7B
UniProtKB Acc F8G430
UniProtKB ID F8G430_PSEP6
UniRef100 UniRef100_F8G430
UniRef50 UniRef50_B1J7J4
UniRef90 UniRef90_F8G430

Product

Feature Type CDS
Coding Frame 1
Product Name
TetR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 0.32
Kyte-Doolittle Hydrophobicity Value -0.079
Molecular Weight (kDa) 21.5
Isoelectric Point (pI) 7.11

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 294 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016486 (110 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_3226

Human Homologs

References

No references are associated with this feature.