Pseudomonas putida S16, PPS_3233

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0043819 precorrin-6A synthase (deacetylating) activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF036525
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009236 cobalamin biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF036525
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008168 methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.30.950.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
MetaCyc cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG ppt01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppt00860 Porphyrin and chlorophyll metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.1010.10 - IPR014777 Tetrapyrrole methylase, subdomain 1 1 142 1.6E-41
PIRSF PIRSF036525 CobF IPR012797 Precorrin-6A synthase [deacetylating] 1 249 7.9E-114
Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IPR000878 Tetrapyrrole methylase 4 221 3.3E-28
PANTHER PTHR43467 COBALT-PRECORRIN-2 C(20)-METHYLTRANSFERASE - - 1 225 5.9E-36
CDD cd11643 Precorrin-6A-synthase IPR012797 Precorrin-6A synthase [deacetylating] 6 247 0.0
NCBIfam TIGR02434 JCVI: precorrin-6A synthase (deacetylating) IPR012797 Precorrin-6A synthase [deacetylating] 2 247 3.0E-108
Gene3D G3DSA:3.30.950.10 - IPR014776 Tetrapyrrole methylase, subdomain 2 143 249 7.3E-42
SUPERFAMILY SSF53790 Tetrapyrrole methylase IPR035996 Tetrapyrrole methylase superfamily 4 247 3.93E-34

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.