Pseudomonas putida S16, PPS_3439
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0016787 | hydrolase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF01546
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0016813 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01879
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | ppt00240 | Pyrimidine metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | ppt01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF55031 | Bacterial exopeptidase dimerisation domain | IPR036264 | Bacterial exopeptidase dimerisation domain | 242 | 358 | 2.84E-29 |
| Gene3D | G3DSA:3.40.630.10 | Zn peptidases | - | - | 44 | 431 | 0.0 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 16 | 33 | - |
| Pfam | PF01546 | Peptidase family M20/M25/M40 | IPR002933 | Peptidase M20 | 109 | 435 | 7.7E-38 |
| CDD | cd03884 | M20_bAS | - | - | 41 | 435 | 0.0 |
| Pfam | PF07687 | Peptidase dimerisation domain | IPR011650 | Peptidase M20, dimerisation domain | 241 | 341 | 2.5E-6 |
| PIRSF | PIRSF001235 | Amidase_hyd_carb | IPR010158 | Amidase, carbamoylase-type | 33 | 442 | 0.0 |
| NCBIfam | TIGR01879 | JCVI: hydantoinase/carbamoylase family amidase | IPR010158 | Amidase, carbamoylase-type | 40 | 435 | 0.0 |
| Gene3D | G3DSA:3.30.70.360 | - | - | - | 242 | 356 | 0.0 |
| SUPERFAMILY | SSF53187 | Zn-dependent exopeptidases | - | - | 28 | 435 | 8.57E-99 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 1 | 33 | - |
| PANTHER | PTHR32494 | ALLANTOATE DEIMINASE-RELATED | IPR010158 | Amidase, carbamoylase-type | 29 | 438 | 6.5E-130 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.