Pseudomonas putida S16, PPS_4140

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PR01021	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0005509	calcium ion binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF103647	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR01023	Sodium-type flagellar protein MotY precursor signature	-	-	210	229	3.2E-7
PRINTS	PR01023	Sodium-type flagellar protein MotY precursor signature	-	-	192	209	3.2E-7
Pfam	PF00691	OmpA family	IPR006665	OmpA-like domain	146	241	8.9E-23
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	217	248	-
SUPERFAMILY	SSF103647	TSP type-3 repeat	IPR028974	TSP type-3 repeat	86	118	3.27E-7
PRINTS	PR01023	Sodium-type flagellar protein MotY precursor signature	-	-	230	248	3.2E-7
PRINTS	PR01021	OMPA domain signature	IPR006664	Outer membrane protein, bacterial	177	192	2.5E-18
PRINTS	PR01021	OMPA domain signature	IPR006664	Outer membrane protein, bacterial	192	208	2.5E-18
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	227	248	-
CDD	cd07185	OmpA_C-like	IPR006665	OmpA-like domain	145	247	6.56628E-47
Gene3D	G3DSA:3.30.1330.60	-	IPR036737	OmpA-like domain superfamily	126	248	2.3E-38
SUPERFAMILY	SSF103088	OmpA-like	IPR036737	OmpA-like domain superfamily	126	246	2.88E-35
PANTHER	PTHR30329	STATOR ELEMENT OF FLAGELLAR MOTOR COMPLEX	-	-	132	246	8.7E-31
PRINTS	PR01021	OMPA domain signature	IPR006664	Outer membrane protein, bacterial	147	169	2.5E-18

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.