Pseudomonas putida S16, PPS_4141

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01021
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005509 calcium ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF103647
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF103088 OmpA-like IPR036737 OmpA-like domain superfamily 86 213 3.27E-36
Pfam PF00691 OmpA family IPR006665 OmpA-like domain 111 207 5.3E-25
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 111 133 9.5E-18
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 157 173 9.5E-18
PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature - - 157 174 3.2E-7
Gene3D G3DSA:4.10.1080.10 - IPR028974 TSP type-3 repeat 45 90 5.3E-5
PANTHER PTHR30329 STATOR ELEMENT OF FLAGELLAR MOTOR COMPLEX - - 101 213 4.6E-34
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 142 157 9.5E-18
CDD cd07185 OmpA_C-like IPR006665 OmpA-like domain 106 213 5.66402E-48
Gene3D G3DSA:3.30.1330.60 - IPR036737 OmpA-like domain superfamily 91 215 1.9E-40
SUPERFAMILY SSF103647 TSP type-3 repeat IPR028974 TSP type-3 repeat 55 86 8.5E-9
MobiDBLite mobidb-lite consensus disorder prediction - - 143 158 -
PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature - - 98 125 3.2E-7
MobiDBLite mobidb-lite consensus disorder prediction - - 143 162 -
PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature - - 196 215 3.2E-7

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.