Pseudomonas putida S16, PPS_4513

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_4513
Name
Replicon chromosome
Genomic location 5098117 - 5099388 (- strand)

Cross-References

RefSeq YP_004703924.1
GI 339489396
Entrez 10940127
INSDC AEJ15044.1
NCBI Locus Tag PPS_4513
UniParc UPI0002173E08
UniProtKB Acc F8G6C4
UniProtKB ID F8G6C4_PSEP6
UniRef100 UniRef100_A0A099N6J3
UniRef50 UniRef50_G8Q662
UniRef90 UniRef90_I7C4V8

Product

Feature Type CDS
Coding Frame 1
Product Name
diguanylate cyclase
Synonyms
Evidence for Translation
Charge (pH 7) -1.17
Kyte-Doolittle Hydrophobicity Value -0.111
Molecular Weight (kDa) 46.4
Isoelectric Point (pI) 6.85

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 456 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001080 (443 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_4513

Human Homologs

References

No references are associated with this feature.