Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR11070
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006281 | DNA repair |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00609
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0005524 | ATP binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF13361
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0008854 | exodeoxyribonuclease V activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00609
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003678 | DNA helicase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR11070
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0016787 | hydrolase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF13361
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | ppt03440 | Homologous recombination | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Gene3D | G3DSA:1.10.3170.10 | Recbcd, chain B, domain 2 | - | - | 156 | 355 | 0.0 |
SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | 9 | 845 | 8.18E-105 |
Pfam | PF00580 | UvrD/REP helicase N-terminal domain | IPR014016 | UvrD-like helicase, ATP-binding domain | 13 | 443 | 1.7E-56 |
Gene3D | G3DSA:3.40.50.300 | - | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | 9 | 445 | 0.0 |
SUPERFAMILY | SSF52980 | Restriction endonuclease-like | IPR011335 | Restriction endonuclease type II-like | 924 | 1210 | 5.36E-70 |
CDD | cd22352 | RecB_C-like | - | - | 926 | 1205 | 2.80532E-72 |
NCBIfam | TIGR00609 | JCVI: exodeoxyribonuclease V subunit beta | IPR004586 | RecBCD enzyme subunit RecB | 9 | 1208 | 0.0 |
Pfam | PF13361 | UvrD-like helicase C-terminal domain | IPR014017 | UvrD-like DNA helicase, C-terminal | 573 | 839 | 1.2E-19 |
PANTHER | PTHR11070 | UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBER | IPR000212 | DNA helicase, UvrD/REP type | 15 | 853 | 2.4E-83 |
Hamap | MF_01485 | RecBCD enzyme subunit RecB [recB]. | IPR004586 | RecBCD enzyme subunit RecB | 3 | 1209 | 20.065281 |
Gene3D | G3DSA:3.90.320.10 | - | IPR011604 | PD-(D/E)XK endonuclease-like domain superfamily | 915 | 1214 | 6.5E-85 |
Gene3D | G3DSA:3.40.50.300 | - | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | 455 | 866 | 0.0 |
Gene3D | G3DSA:1.10.486.10 | PCRA; domain 4 | - | - | 604 | 749 | 0.0 |