Pseudomonas putida S16, PPS_4793
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0008237 | metallopeptidase activity |
Inferred from Sequence Model
Term mapped from: InterPro:SSF111283
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Biological Process | GO:0006508 | proteolysis |
Inferred from Sequence Model
Term mapped from: InterPro:SSF111283
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF19289 | PmbA/TldA metallopeptidase C-terminal domain | IPR045569 | Metalloprotease TldD/E, C-terminal domain | 236 | 473 | 3.7E-26 |
| Coils | Coil | Coil | - | - | 75 | 95 | - |
| Gene3D | G3DSA:3.30.2290.10 | PmbA/TldD superfamily | IPR035068 | Metalloprotease TldD/PmbA, N-terminal | 12 | 227 | 1.0E-20 |
| PANTHER | PTHR30624 | UNCHARACTERIZED PROTEIN TLDD AND PMBA | - | - | 8 | 477 | 1.6E-103 |
| SUPERFAMILY | SSF111283 | Putative modulator of DNA gyrase, PmbA/TldD | IPR036059 | Metalloprotease TldD/PmbA superfamily | 5 | 475 | 1.83E-94 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.