Pseudomonas putida BIRD-1, PPUBIRD1_0148

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0046872 metal ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01297
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0030001 metal ion transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01297
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006829 zinc ion transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd01019
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007155 cell adhesion
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00690
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppb02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
MobiDBLite mobidb-lite consensus disorder prediction - - 85 107 -
Pfam PF01297 Zinc-uptake complex component A periplasmic IPR006127 Periplasmic solute binding protein, ZnuA-like 2 268 9.7E-52
Coils Coil Coil - - 141 161 -
FunFam G3DSA:3.40.50.1980:FF:000006 Zinc ABC transporter substrate-binding protein ZnuA - - 168 280 2.3E-43
CDD cd01019 ZnuA IPR035520 High-affinity zinc uptake system protein ZnuA 2 278 8.91281E-112
Gene3D G3DSA:3.40.50.1980 Nitrogenase molybdenum iron protein domain - - 1 166 3.8E-47
SUPERFAMILY SSF53807 Helical backbone metal receptor - - 2 278 1.08E-69
FunFam G3DSA:3.40.50.1980:FF:000028 High-affinity zinc uptake system protein znuA - - 1 167 2.9E-67
PRINTS PR00690 Adhesin family signature IPR006128 Adhesion lipoprotein 167 188 8.7E-5
Gene3D G3DSA:3.40.50.1980 Nitrogenase molybdenum iron protein domain - - 169 280 3.6E-22
PRINTS PR00690 Adhesin family signature IPR006128 Adhesion lipoprotein 29 42 8.7E-5
PANTHER PTHR42953 HIGH-AFFINITY ZINC UPTAKE SYSTEM PROTEIN ZNUA-RELATED - - 1 278 3.8E-58
PRINTS PR00690 Adhesin family signature IPR006128 Adhesion lipoprotein 42 59 8.7E-5

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.