Pseudomonas putida BIRD-1, PPUBIRD1_0154

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0020037 heme binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00034
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0042597 periplasmic space
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000005
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005506 iron ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000005
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0009055 electron transfer activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00034
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF46626 Cytochrome c IPR036909 Cytochrome c-like domain superfamily 11 98 5.11E-20
PANTHER PTHR33751 CBB3-TYPE CYTOCHROME C OXIDASE SUBUNIT FIXP - - 16 200 2.2E-45
SUPERFAMILY SSF46626 Cytochrome c IPR036909 Cytochrome c-like domain superfamily 103 199 5.59E-22
Pfam PF00034 Cytochrome c IPR009056 Cytochrome c-like domain 110 198 4.0E-9
Gene3D G3DSA:1.10.760.10 - IPR036909 Cytochrome c-like domain superfamily 21 99 1.6E-24
PIRSF PIRSF000005 Cytochrome_c4 IPR024167 Cytochrome c4-like 1 200 2.5E-61
FunFam G3DSA:1.10.760.10:FF:000016 Cytochrome c4 - - 20 101 1.2E-43
Pfam PF00034 Cytochrome c IPR009056 Cytochrome c-like domain 30 98 5.2E-7
Gene3D G3DSA:1.10.760.10 - IPR036909 Cytochrome c-like domain superfamily 102 200 1.7E-28

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.