Pseudomonas putida BIRD-1, PPUBIRD1_0159
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR33121 | CYCLIC DI-GMP PHOSPHODIESTERASE PDEF | - | - | 274 | 524 | 1.2E-77 |
| Pfam | PF12792 | CSS motif domain associated with EAL | IPR024744 | Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain | 47 | 243 | 3.3E-33 |
| Pfam | PF00563 | EAL domain | IPR001633 | EAL domain | 280 | 513 | 5.4E-62 |
| Gene3D | G3DSA:3.20.20.450 | EAL domain | IPR035919 | EAL domain superfamily | 274 | 528 | 2.2E-81 |
| SUPERFAMILY | SSF141868 | EAL domain-like | IPR035919 | EAL domain superfamily | 280 | 525 | 1.09E-73 |
| Coils | Coil | Coil | - | - | 58 | 78 | - |
| SMART | SM00052 | duf2_2 | IPR001633 | EAL domain | 274 | 518 | 5.1E-82 |
| CDD | cd01948 | EAL | IPR001633 | EAL domain | 280 | 518 | 1.13311E-92 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.