Pseudomonas putida BIRD-1, PPUBIRD1_0171
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Cellular Component | GO:0043190 | ATP-binding cassette (ABC) transporter complex |
Inferred from Sequence Model
Term mapped from: InterPro:PF02405
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | ppb02010 | ABC transporters | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR30188 | ABC TRANSPORTER PERMEASE PROTEIN-RELATED | IPR030802 | ABC transporter permease MalE | 115 | 371 | 5.1E-69 |
| Gene3D | G3DSA:3.30.750.24 | STAS domain | IPR036513 | STAS domain superfamily | 4 | 89 | 5.3E-5 |
| NCBIfam | TIGR00056 | JCVI: MlaE family lipid ABC transporter permease subunit | IPR003453 | ABC transport permease subunit MlaE, proteobacteria | 122 | 370 | 1.1E-70 |
| Pfam | PF02405 | Permease MlaE | IPR030802 | ABC transporter permease MalE | 158 | 367 | 5.7E-69 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.