Pseudomonas putida BIRD-1, PPUBIRD1_0171

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0043190 ATP-binding cassette (ABC) transporter complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30188
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppb02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR30188 ABC TRANSPORTER PERMEASE PROTEIN-RELATED IPR030802 ABC transporter permease MalE 6 374 1.8E-130
Pfam PF02405 Permease MlaE IPR030802 ABC transporter permease MalE 158 367 5.7E-69
Gene3D G3DSA:3.30.750.24 STAS domain IPR036513 STAS domain superfamily 4 89 5.3E-5
TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit IPR003453 ABC transport permease subunit MlaE, Proteobacteria 122 370 3.3E-71
PANTHER PTHR30188:SF3 ABC TRANSPORTER PERMEASE - - 6 374 1.8E-130

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.