Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PR00039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PR00039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 90 | 291 | 6.4E-33 |
FunFam | G3DSA:3.40.190.10:FF:000017 | Glycine cleavage system transcriptional activator | - | - | 164 | 261 | 1.5E-27 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 6 | 85 | 5.6E-19 |
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 95 | 295 | 9.05E-35 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 99 | 288 | 8.9E-47 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 164 | 261 | 8.9E-47 |
CDD | cd08481 | PBP2_GcdR_like | - | - | 95 | 288 | 5.13129E-113 |
PANTHER | PTHR30537 | HTH-TYPE TRANSCRIPTIONAL REGULATOR | - | - | 9 | 294 | 4.6E-69 |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 11 | 66 | 1.0E-17 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 34 | 44 | 6.3E-7 |
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 4 | 81 | 9.4E-19 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 44 | 55 | 6.3E-7 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 23 | 34 | 6.3E-7 |