Pseudomonas putida BIRD-1, PPUBIRD1_0393

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF028103
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Coils Coil 102 122 -
Coils Coil 148 168 -
SUPERFAMILY SSF55021 1 68 3.62E-13
PIRSF PIRSF028103 IPR016867 Glycine cleavage system transcriptional repressor 1 172 2.4E-60
ProSiteProfiles PS51671 ACT domain profile. IPR002912 ACT domain 5 78 7.036
Pfam PF13740 ACT domain 3 67 8.2E-12
SUPERFAMILY SSF55021 87 168 6.66E-15
CDD cd04869 ACT_GcvR_2 90 169 5.42525E-24
Gene3D G3DSA:3.30.70.260 83 169 1.8E-22
ProSiteProfiles PS51671 ACT domain profile. IPR002912 ACT domain 90 169 8.78
Gene3D G3DSA:3.30.70.260 1 77 3.8E-18

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.