Pseudomonas putida BIRD-1, PPUBIRD1_0636

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0019829 ATPase-coupled cation transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01525
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006812 cation transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01525
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01494
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000166 nucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.1110.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005507 copper ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00003
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01494
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0046872 metal ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF55008
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005215 transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01494
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01525
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00119 P-type cation-transporting ATPase superfamily signature - - 707 719 1.1E-21
SFLD SFLDF00027 p-type atpase IPR044492 P-type ATPase, haloacid dehalogenase domain 466 736 0.0
Pfam PF00702 haloacid dehalogenase-like hydrolase - - 481 698 3.1E-41
PRINTS PR00119 P-type cation-transporting ATPase superfamily signature - - 684 703 1.1E-21
CDD cd02094 P-type_ATPase_Cu-like - - 182 787 0.0
SUPERFAMILY SSF56784 HAD-like IPR036412 HAD-like superfamily 483 784 4.78E-56
PRINTS PR00943 Copper-transporting ATPase signature - - 204 223 3.4E-15
PANTHER PTHR43520 ATP7, ISOFORM B - - 4 790 0.0
Pfam PF00122 E1-E2 ATPase - - 285 464 2.0E-52
PRINTS PR00943 Copper-transporting ATPase signature - - 467 482 3.4E-15
Pfam PF00403 Heavy-metal-associated domain IPR006121 Heavy metal-associated domain, HMA 75 133 7.8E-12
NCBIfam TIGR01494 JCVI: HAD-IC family P-type ATPase IPR001757 P-type ATPase 257 767 3.7E-86
FunFam G3DSA:3.30.70.100:FF:000005 Copper-exporting P-type ATPase A - - 69 138 2.9E-20
CDD cd00371 HMA IPR006121 Heavy metal-associated domain, HMA 74 136 2.41077E-18
Pfam PF00403 Heavy-metal-associated domain IPR006121 Heavy metal-associated domain, HMA 11 66 1.4E-12
PRINTS PR00943 Copper-transporting ATPase signature - - 274 292 3.4E-15
SUPERFAMILY SSF55008 HMA, heavy metal-associated domain IPR036163 Heavy metal-associated domain superfamily 4 68 2.62E-17
NCBIfam TIGR00003 JCVI: copper ion binding protein IPR006122 Heavy metal-associated domain, copper ion-binding 74 135 2.9E-11
Gene3D G3DSA:3.30.70.100 - - - 73 138 7.4E-20
PRINTS PR00943 Copper-transporting ATPase signature - - 87 101 3.4E-15
FunFam G3DSA:2.70.150.10:FF:000020 Copper-exporting P-type ATPase A - - 272 388 3.2E-36
Gene3D G3DSA:3.30.70.100 - - - 4 71 3.8E-18
PRINTS PR00943 Copper-transporting ATPase signature - - 407 421 3.4E-15
PRINTS PR00943 Copper-transporting ATPase signature - - 254 273 3.4E-15
CDD cd00371 HMA IPR006121 Heavy metal-associated domain, HMA 9 68 8.80006E-17
PRINTS PR00119 P-type cation-transporting ATPase superfamily signature - - 632 642 1.1E-21
NCBIfam TIGR01511 JCVI: copper-translocating P-type ATPase - - 201 787 0.0
SUPERFAMILY SSF81653 Calcium ATPase, transduction domain A IPR008250 P-type ATPase, A domain superfamily 287 384 7.45E-24
PRINTS PR00119 P-type cation-transporting ATPase superfamily signature - - 484 498 1.1E-21
Gene3D G3DSA:2.70.150.10 - - - 272 388 3.7E-31
Gene3D G3DSA:3.40.1110.10 - IPR023299 P-type ATPase, cytoplasmic domain N 495 616 2.3E-26
PRINTS PR00943 Copper-transporting ATPase signature - - 662 679 3.4E-15
NCBIfam TIGR00003 JCVI: copper ion binding protein IPR006122 Heavy metal-associated domain, copper ion-binding 8 68 1.5E-7
PRINTS PR00119 P-type cation-transporting ATPase superfamily signature - - 334 348 1.1E-21
NCBIfam TIGR01525 JCVI: heavy metal translocating P-type ATPase IPR027256 P-type ATPase, subfamily IB 219 785 0.0
Gene3D G3DSA:3.40.50.1000 - IPR023214 HAD superfamily 451 741 8.1E-59
SFLD SFLDG00002 C1.7: P-type atpase like - - 466 736 0.0
SUPERFAMILY SSF81665 Calcium ATPase, transmembrane domain M IPR023298 P-type ATPase, transmembrane domain superfamily 254 760 1.44E-15
SUPERFAMILY SSF55008 HMA, heavy metal-associated domain IPR036163 Heavy metal-associated domain superfamily 70 139 1.96E-18

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.