Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006544 | glycine metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:MF_00711
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0004375 | glycine dehydrogenase (decarboxylating) activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF02347
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006546 | glycine catabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:PF02347
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | ppb00630 | Glyoxylate and dicarboxylate metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | ppb01200 | Carbon metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | ppb01110 | Biosynthesis of secondary metabolites | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | ppb01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | ppb01130 | Biosynthesis of antibiotics | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | ppb00260 | Glycine, serine and threonine metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Gene3D | G3DSA:3.40.640.10 | - | IPR015421 | Pyridoxal phosphate-dependent transferase, major domain | 520 | 761 | 6.8E-73 |
Pfam | PF02347 | Glycine cleavage system P-protein | IPR020581 | Glycine cleavage system P protein | 458 | 731 | 2.2E-13 |
FunFam | G3DSA:3.90.1150.10:FF:000007 | Glycine dehydrogenase (decarboxylating), mitochondrial | - | - | 758 | 896 | 9.6E-73 |
NCBIfam | TIGR00461 | JCVI: aminomethyl-transferring glycine dehydrogenase | IPR003437 | Glycine dehydrogenase (decarboxylating) | 14 | 942 | 0.0 |
SUPERFAMILY | SSF53383 | PLP-dependent transferases | IPR015424 | Pyridoxal phosphate-dependent transferase | 14 | 438 | 1.44E-97 |
FunFam | G3DSA:3.40.640.10:FF:000007 | glycine dehydrogenase (Decarboxylating), mitochondrial | - | - | 519 | 750 | 4.3E-120 |
PANTHER | PTHR11773 | GLYCINE DEHYDROGENASE, DECARBOXYLATING | IPR020581 | Glycine cleavage system P protein | 5 | 948 | 0.0 |
Pfam | PF02347 | Glycine cleavage system P-protein | IPR020581 | Glycine cleavage system P protein | 14 | 438 | 0.0 |
CDD | cd00613 | GDC-P | IPR020581 | Glycine cleavage system P protein | 480 | 865 | 0.0 |
Gene3D | G3DSA:3.90.1150.10 | Aspartate Aminotransferase, domain 1 | IPR015422 | Pyridoxal phosphate-dependent transferase, small domain | 81 | 409 | 3.0E-82 |
FunFam | G3DSA:3.40.640.10:FF:000005 | Glycine dehydrogenase (decarboxylating), mitochondrial | - | - | 92 | 352 | 0.0 |
Hamap | MF_00711 | Glycine dehydrogenase (decarboxylating) [gcvP]. | IPR003437 | Glycine dehydrogenase (decarboxylating) | 5 | 948 | 26.200958 |
Gene3D | G3DSA:3.90.1150.10 | Aspartate Aminotransferase, domain 1 | IPR015422 | Pyridoxal phosphate-dependent transferase, small domain | 762 | 896 | 5.1E-46 |
SUPERFAMILY | SSF53383 | PLP-dependent transferases | IPR015424 | Pyridoxal phosphate-dependent transferase | 472 | 943 | 2.92E-106 |
Gene3D | G3DSA:3.40.640.10 | - | IPR015421 | Pyridoxal phosphate-dependent transferase, major domain | 92 | 352 | 3.0E-82 |