Pseudomonas putida BIRD-1, PPUBIRD1_1144

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005886 plasma membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01947
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0022900 electron transport chain
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01947
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0010181 FMN binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00900
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00900
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0009055 electron transfer activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01947
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00900 FMN_bind_2 IPR007329 FMN-binding 91 179 2.6E-24
NCBIfam TIGR01947 JCVI: RnfABCDGE type electron transport complex subunit G IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG 3 181 2.6E-52
Pfam PF04205 FMN-binding domain IPR007329 FMN-binding 91 176 1.6E-15
PANTHER PTHR36118 ION-TRANSLOCATING OXIDOREDUCTASE COMPLEX SUBUNIT G IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG 3 185 6.4E-32
PIRSF PIRSF006091 E_trnsport_RnfG IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG 1 193 9.9E-42

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.