Pseudomonas putida BIRD-1, PPUBIRD1_1152

Gene Feature Overview

Strain	Pseudomonas putida BIRD-1 GCF_000183645.1|latest
Locus Tag	PPUBIRD1_1152
Name
Replicon	chromosome
Genomic location	1300241 - 1300891 (- strand)

Cross-References

RefSeq	YP_005929039.1
GI	386010762
Entrez	12519386
NCBI Locus Tag	PPUBIRD1_1152

Product

Feature Type	CDS
Coding Frame	1
Product Name	ICC-like phosphoesterase
Synonyms
Evidence for Translation
Charge (pH 7)	5.06
Kyte-Doolittle Hydrophobicity Value	-0.171
Molecular Weight (kDa)	24339.8
Isoelectric Point (pI)	8.74

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
6NVO	DNA BINDING PROTEIN	02/05/19	Crystal structure of Pseudomonas putida nuclease MPE	Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440)	2.196	X-RAY DIFFRACTION	97.2
6NVP	DNA BINDING PROTEIN	02/05/19	Crystal structure of Pseudomonas putida nuclease MPE	Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440)	2	X-RAY DIFFRACTION	97.2

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 144 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG015265 (182 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PPUBIRD1_1152 Search term: ICC-like phosphoesterase

Human Homologs

References