Pseudomonas putida BIRD-1, PPUBIRD1_1160
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0000166 | nucleotide binding |
Inferred from Sequence Model
Term mapped from: InterPro:SSF55186
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.30.980.10 | - | - | - | 118 | 246 | 3.5E-20 |
| Gene3D | G3DSA:2.40.30.130 | - | - | - | 3 | 109 | 1.4E-13 |
| SUPERFAMILY | SSF50447 | Translation proteins | IPR009000 | Translation protein, beta-barrel domain superfamily | 10 | 72 | 3.04E-9 |
| SUPERFAMILY | SSF55186 | ThrRS/AlaRS common domain | IPR018163 | Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily | 121 | 247 | 8.37E-24 |
| PANTHER | PTHR43462 | ALANYL-TRNA EDITING PROTEIN | - | - | 12 | 244 | 2.0E-17 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.