Pseudomonas putida BIRD-1, PPUBIRD1_1165
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF17775 | UPF0225 domain | - | - | 30 | 128 | 1.6E-26 |
| Pfam | PF02810 | SEC-C motif | IPR004027 | SEC-C motif | 137 | 154 | 4.1E-9 |
| PANTHER | PTHR33747 | UPF0225 PROTEIN SCO1677 | - | - | 75 | 155 | 2.0E-16 |
| Gene3D | G3DSA:3.10.450.50 | - | - | - | 1 | 157 | 1.7E-51 |
| SUPERFAMILY | SSF103642 | Sec-C motif | - | - | 134 | 156 | 1.44E-7 |
| SUPERFAMILY | SSF54427 | NTF2-like | IPR032710 | NTF2-like domain superfamily | 26 | 130 | 2.02E-31 |
| Hamap | MF_00612 | UPF0225 protein YchJ [ychJ]. | IPR023006 | Uncharacterised protein family UPF0225 | 3 | 130 | 26.204149 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.