Pseudomonas putida BIRD-1, PPUBIRD1_1791 (nudC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0046872 metal ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF09297
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016787 hydrolase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF09296
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000210 NAD+ diphosphatase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00297
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
MetaCyc NAD salvage pathway II (PNC IV cycle) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG ppb01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc pyridine nucleotide cycling (plants) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG ppb00760 Nicotinate and nicotinamide metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00293 NUDIX domain IPR000086 NUDIX hydrolase domain 144 255 1.2E-19
Pfam PF09297 NADH pyrophosphatase zinc ribbon domain IPR015376 Zinc ribbon, NADH pyrophosphatase 107 138 6.5E-11
Hamap MF_00297 NAD-capped RNA hydrolase NudC [nudC]. IPR022925 NAD-capped RNA hydrolase NudC 6 271 49.147259
SUPERFAMILY SSF55811 Nudix IPR015797 NUDIX hydrolase-like domain superfamily 5 110 2.43E-19
Gene3D G3DSA:3.90.79.20 - - - 10 139 4.2E-23
PANTHER PTHR42904 NUDIX HYDROLASE, NUDC SUBFAMILY - - 76 245 1.1E-53
SUPERFAMILY SSF55811 Nudix IPR015797 NUDIX hydrolase-like domain superfamily 93 262 4.33E-43
Gene3D G3DSA:3.90.79.10 Nucleoside Triphosphate Pyrophosphohydrolase - - 140 267 1.9E-38
CDD cd03429 NADH_pyrophosphatase - - 143 265 4.90147E-53
Pfam PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain IPR015375 NADH pyrophosphatase-like, N-terminal 28 105 1.3E-7

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.