Pseudomonas putida BIRD-1, PPUBIRD1_2228
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:PF07690
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Molecular Function | GO:0022857 | transmembrane transporter activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF07690
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | IPR036259 | MFS transporter superfamily | 13 | 395 | 2.2E-43 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | IPR036259 | MFS transporter superfamily | 15 | 398 | 5.62E-53 |
| CDD | cd17324 | MFS_NepI_like | - | - | 20 | 393 | 9.29843E-53 |
| PANTHER | PTHR42910 | TRANSPORTER SCO4007-RELATED | - | - | 11 | 397 | 5.5E-115 |
| Pfam | PF07690 | Major Facilitator Superfamily | IPR011701 | Major facilitator superfamily | 21 | 330 | 7.9E-31 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.