Pseudomonas putida BIRD-1, PPUBIRD1_2813
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50891 | Cyclophilin-like | IPR029000 | Cyclophilin-like domain superfamily | 178 | 304 | 1.38E-10 |
| NCBIfam | TIGR00724 | JCVI: biotin-dependent carboxylase uncharacterized domain | IPR003778 | Carboxyltransferase domain, subdomain A and B | 1 | 320 | 3.5E-81 |
| Coils | Coil | Coil | - | - | 301 | 321 | - |
| Gene3D | G3DSA:2.40.100.10 | - | IPR029000 | Cyclophilin-like domain superfamily | 176 | 322 | 9.3E-40 |
| SMART | SM00797 | ahs2 | IPR003778 | Carboxyltransferase domain, subdomain A and B | 23 | 314 | 0.0 |
| PANTHER | PTHR43309 | 5-OXOPROLINASE SUBUNIT C | - | - | 1 | 318 | 4.1E-103 |
| Pfam | PF02626 | Carboxyltransferase domain, subdomain A and B | IPR003778 | Carboxyltransferase domain, subdomain A and B | 24 | 296 | 6.4E-90 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.