Pseudomonas putida HB3267, B479_02325
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 213 | 321 | 1.1E-24 |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 205 | 388 | 1.6E-42 |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 206 | 389 | 3.1E-49 |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 216 | 385 | 1.01744E-43 |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 220 | 389 | 8.63E-39 |
| PANTHER | PTHR45138 | REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM | - | - | 208 | 390 | 4.1E-54 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 325 | 344 | - |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 215 | 383 | 1.4E-29 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.