Pseudomonas putida HB3267, B479_09580

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00082
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00082
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08447
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 536 658 3.1E-24
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 587 601 3.4E-14
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 130 257 1.1E-13
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 6 118 1.1E-13
Gene3D G3DSA:3.30.450.20 PAS domain - - 140 256 1.8E-21
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 642 655 3.4E-14
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 498 664 3.9E-39
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 605 615 3.4E-14
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 618 636 3.4E-14
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 485 659 1.3E-35
SMART SM00091 pas_2 IPR000014 PAS domain 283 349 0.0081
PANTHER PTHR43065 SENSOR HISTIDINE KINASE - - 261 662 4.4E-64
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 537 656 8.6E-17
SMART SM00086 pac_2 IPR001610 PAC motif 355 391 81.0
SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily 415 492 4.12E-11
Gene3D G3DSA:3.40.50.2300 - - - 2 139 1.8E-20
CDD cd00156 REC - - 684 777 7.29596E-24
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 4 155 1.07E-23
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 9 116 5.9E-12
Coils Coil Coil - - 124 151 -
CDD cd00156 REC - - 9 108 4.62804E-18
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 681 787 9.3E-23
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 683 786 8.5E-18
Gene3D G3DSA:1.10.287.130 - - - 419 494 6.5E-20
Coils Coil Coil - - 455 475 -
SMART SM00086 pac_2 IPR001610 PAC motif 218 260 0.1
CDD cd00130 PAS IPR000014 PAS domain 166 257 1.64167E-5
Gene3D G3DSA:3.40.50.2300 - - - 680 795 5.9E-27
Pfam PF08447 PAS fold IPR013655 PAS fold-3 167 253 5.1E-10
Coils Coil Coil - - 398 425 -
SMART SM00388 HisKA_10 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 427 495 2.4E-9
SMART SM00091 pas_2 IPR000014 PAS domain 143 210 6.5
Pfam PF00512 His Kinase A (phospho-acceptor) domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 429 493 3.6E-8
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 290 394 8.72E-13
Pfam PF08448 PAS fold IPR013656 PAS fold-4 290 392 4.1E-13
CDD cd00082 HisKA IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 425 491 6.42604E-9
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 681 792 5.41E-28
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 286 394 2.6E-7
Gene3D G3DSA:3.30.450.20 PAS domain - - 260 389 8.9E-13

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.