Pseudomonas putida HB3267, B479_14100

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF160719 gpW/gp25-like - - 35 146 4.45E-8
Gene3D G3DSA:3.10.450.40 - - - 23 149 1.9E-5
NCBIfam TIGR03357 JCVI: type VI secretion system baseplate subunit TssE IPR017737 Type VI secretion system protein TssE1-like 9 156 5.1E-34
Pfam PF04965 Baseplate wedge protein gp25 IPR007048 IraD/Gp25-like 36 135 1.1E-13
PANTHER PTHR38595 CYTOPLASMIC PROTEIN-RELATED - - 3 157 2.2E-21

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.