Pseudomonas putida HB3267, B479_14115

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07724
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppuh03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppuh02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Coils Coil Coil - - 434 454 -
CDD cd19499 RecA-like_ClpB_Hsp104-like - - 561 767 5.41278E-78
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 601 619 1.5E-32
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 546 844 1.02E-64
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 597 755 5.6E-9
SMART SM01086 ClpB_D2_small_2 IPR019489 Clp ATPase, C-terminal 769 862 4.9E-8
Pfam PF00004 ATPase family associated with various cellular activities (AAA) IPR003959 ATPase, AAA-type, core 225 337 1.1E-8
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 220 365 2.7E-10
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 646 664 1.5E-32
Pfam PF02861 Clp amino terminal domain, pathogenicity island component IPR004176 Clp, repeat (R) domain 21 73 4.0E-6
Pfam PF17871 AAA lid domain IPR041546 ClpA/ClpB, AAA lid domain 365 457 1.6E-28
CDD cd00009 AAA - - 204 363 5.81296E-14
Coils Coil Coil - - 465 485 -
PANTHER PTHR11638 ATP-DEPENDENT CLP PROTEASE - - 14 843 0.0
MobiDBLite mobidb-lite consensus disorder prediction - - 158 181 -
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 366 544 4.4E-45
NCBIfam TIGR03345 JCVI: type VI secretion system ATPase TssH IPR017729 AAA+ ATPase ClpV1 10 853 0.0
FunFam G3DSA:3.40.50.300:FF:000025 ATP-dependent Clp protease subunit - - 550 767 3.5E-79
Pfam PF07724 AAA domain (Cdc48 subfamily) IPR003959 ATPase, AAA-type, core 596 763 3.7E-42
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 708 722 1.5E-32
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 171 364 1.3E-70
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 675 693 1.5E-32
FunFam G3DSA:3.40.50.300:FF:000010 Chaperone clpB 1, putative - - 171 364 4.2E-82
Gene3D G3DSA:1.10.1780.10 - IPR036628 Clp, N-terminal domain superfamily 1 158 1.1E-39
Gene3D G3DSA:1.10.8.60 - - - 770 861 7.4E-10
SUPERFAMILY SSF81923 Double Clp-N motif IPR036628 Clp, N-terminal domain superfamily 9 127 6.87E-18
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 181 507 4.97E-71
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 550 767 1.1E-68
Pfam PF10431 C-terminal, D2-small domain, of ClpB protein IPR019489 Clp ATPase, C-terminal 772 843 8.5E-13

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.