Pseudomonas putida HB3267, B479_14125

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppuh02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR03353 JCVI: type VI secretion system baseplate subunit TssK IPR010263 Type VI secretion system TssK 5 445 1.1E-128
Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE IPR010263 Type VI secretion system TssK 19 445 0.0
PANTHER PTHR35566 BLR3599 PROTEIN IPR010263 Type VI secretion system TssK 1 446 3.7E-107

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.